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New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp. MP131-18.
Paulus, Constanze Rebets, Yuriy Tokovenko, Bogdan Nadmid, Suvd Terekhova, Larisa P Myronovskyi, Maksym Zotchev, Sergey B Rückert, Christian Braig, Simone Zahler, Stefan
Paulus, Constanze
Rebets, Yuriy
Tokovenko, Bogdan
Nadmid, Suvd
Terekhova, Larisa P
Myronovskyi, Maksym
Zotchev, Sergey B
Rückert, Christian
Braig, Simone
Zahler, Stefan
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2017-02-10
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Abstract
Marine actinobacteria are drawing more and more attention as a promising source of new natural products. Here we report isolation, genome sequencing and metabolic profiling of new strain Streptomyces sp. MP131-18 isolated from marine sediment sample collected in the Trondheim Fjord, Norway. The 16S rRNA and multilocus phylogenetic analysis showed that MP131-18 belongs to the genus Streptomyces. The genome of MP131-18 isolate was sequenced, and 36 gene clusters involved in the biosynthesis of 18 different types of secondary metabolites were predicted using antiSMASH analysis. The combined genomics-metabolics profiling of the strain led to the identification of several new biologically active compounds. As a result, the family of bisindole pyrroles spiroindimicins was extended with two new members, spiroindimicins E and F. Furthermore, prediction of the biosynthetic pathway for unusual α-pyrone lagunapyrone isolated from MP131-18 resulted in foresight and identification of two new compounds of this family - lagunapyrones D and E. The diversity of identified and predicted compounds from Streptomyces sp. MP131-18 demonstrates that marine-derived actinomycetes are not only a promising source of new natural products, but also represent a valuable pool of genes for combinatorial biosynthesis of secondary metabolites.
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New natural products identified by combined genomics-metabolomics profiling of marine Streptomyces sp. MP131-18. 2017, 7:42382 Sci Rep
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en
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2045-2322