MatrixCatch--a novel tool for the recognition of composite regulatory elements in promoters.
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Authors
Deyneko, Igor VKel, Alexander E
Kel-Margoulis, Olga V
Deineko, Elena V
Wingender, Edgar
Weiss, Siegfried
Issue Date
2013
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Show full item recordAbstract
Accurate recognition of regulatory elements in promoters is an essential prerequisite for understanding the mechanisms of gene regulation at the level of transcription. Composite regulatory elements represent a particular type of such transcriptional regulatory elements consisting of pairs of individual DNA motifs. In contrast to the present approach, most available recognition techniques are based purely on statistical evaluation of the occurrence of single motifs. Such methods are limited in application, since the accuracy of recognition is greatly dependent on the size and quality of the sequence dataset. Methods that exploit available knowledge and have broad applicability are evidently needed.Citation
MatrixCatch--a novel tool for the recognition of composite regulatory elements in promoters. 2013, 14:241 BMC BioinformaticsAffiliation
Department of Molecular Immunology, Helmholtz Centre for Infection Research, Braunschweig, Germany. Igor.Deyneko@helmholtz-hzi.deJournal
BMC bioinformaticsPubMed ID
23924163Type
ArticleLanguage
enISSN
1471-2105ae974a485f413a2113503eed53cd6c53
10.1186/1471-2105-14-241
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