GeneReporter--sequence-based document retrieval and annotation.
dc.contributor.author | Bartsch, Annekathrin | |
dc.contributor.author | Bunk, Boyke | |
dc.contributor.author | Haddad, Isam | |
dc.contributor.author | Klein, Johannes | |
dc.contributor.author | Münch, Richard | |
dc.contributor.author | Johl, Thorsten | |
dc.contributor.author | Kärst, Uwe | |
dc.contributor.author | Jänsch, Lothar | |
dc.contributor.author | Jahn, Dieter | |
dc.contributor.author | Retter, Ida | |
dc.date.accessioned | 2014-08-25T09:14:20Z | en |
dc.date.available | 2014-08-25T09:14:20Z | en |
dc.date.issued | 2011-04-01 | en |
dc.identifier.citation | GeneReporter--sequence-based document retrieval and annotation. 2011, 27 (7):1034-5 Bioinformatics | en |
dc.identifier.issn | 1367-4811 | en |
dc.identifier.pmid | 21310745 | en |
dc.identifier.doi | 10.1093/bioinformatics/btr047 | en |
dc.identifier.uri | http://hdl.handle.net/10033/325184 | en |
dc.description.abstract | GeneReporter is a web tool that reports functional information and relevant literature on a protein-coding sequence of interest. Its purpose is to support both manual genome annotation and document retrieval. PubMed references corresponding to a sequence are detected by the extraction of query words from UniProt entries of homologous sequences. Data on protein families, domains, potential cofactors, structure, function, cellular localization, metabolic contribution and corresponding DNA binding sites complement the information on a given gene product of interest. | |
dc.language.iso | en | en |
dc.rights | Archived with thanks to Bioinformatics (Oxford, England) | en |
dc.subject.mesh | Computational Biology | en |
dc.subject.mesh | Data Mining | en |
dc.subject.mesh | Databases, Genetic | en |
dc.subject.mesh | Internet | en |
dc.subject.mesh | Molecular Sequence Annotation | en |
dc.subject.mesh | Proteins | en |
dc.subject.mesh | PubMed | en |
dc.subject.mesh | Sequence Analysis, Protein | en |
dc.subject.mesh | Sequence Homology, Amino Acid | en |
dc.subject.mesh | Software | en |
dc.title | GeneReporter--sequence-based document retrieval and annotation. | en |
dc.type | Article | en |
dc.contributor.department | Helmholtz Centre for infection research, Inhoffenstr. 7, D-38124 Braunschweig, Germany. | en |
dc.identifier.journal | Bioinformatics (Oxford, England) | en |
refterms.dateFOA | 2018-06-12T16:46:41Z | |
html.description.abstract | GeneReporter is a web tool that reports functional information and relevant literature on a protein-coding sequence of interest. Its purpose is to support both manual genome annotation and document retrieval. PubMed references corresponding to a sequence are detected by the extraction of query words from UniProt entries of homologous sequences. Data on protein families, domains, potential cofactors, structure, function, cellular localization, metabolic contribution and corresponding DNA binding sites complement the information on a given gene product of interest. |