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dc.contributor.authorGöker, Markus
dc.contributor.authorLu, Megan
dc.contributor.authorFiebig, Anne
dc.contributor.authorNolan, Matt
dc.contributor.authorLapidus, Alla
dc.contributor.authorTice, Hope
dc.contributor.authorDel Rio, Tijana Glavina
dc.contributor.authorCheng, Jan-Fang
dc.contributor.authorHan, Cliff
dc.contributor.authorTapia, Roxanne
dc.contributor.authorGoodwin, Lynne A
dc.contributor.authorPitluck, Sam
dc.contributor.authorLiolios, Konstantinos
dc.contributor.authorMavromatis, Konstantinos
dc.contributor.authorPagani, Ioanna
dc.contributor.authorIvanova, Natalia
dc.contributor.authorMikhailova, Natalia
dc.contributor.authorPati, Amrita
dc.contributor.authorChen, Amy
dc.contributor.authorPalaniappan, Krishna
dc.contributor.authorLand, Miriam
dc.contributor.authorMayilraj, Shanmugam
dc.contributor.authorRohde, Manfred
dc.contributor.authorDetter, John C
dc.contributor.authorBunk, Boyke
dc.contributor.authorSpring, Stefan
dc.contributor.authorWirth, Reinhard
dc.contributor.authorWoyke, Tanja
dc.contributor.authorBristow, James
dc.contributor.authorEisen, Jonathan A
dc.contributor.authorMarkowitz, Victor
dc.contributor.authorHugenholtz, Philip
dc.contributor.authorKyrpides, Nikos C
dc.contributor.authorKlenk, Hans-Peter
dc.date.accessioned2014-11-10T15:24:49Z
dc.date.available2014-11-10T15:24:49Z
dc.date.issued2014-06-15
dc.identifier.citationGenome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia. 2014, 9 (3):1076-88 Stand Genomic Scien
dc.identifier.issn1944-3277
dc.identifier.pmid25197484
dc.identifier.doi10.4056/sigs.5138968
dc.identifier.urihttp://hdl.handle.net/10033/333896
dc.description.abstractMethanoplanus limicola Wildgruber et al. 1984 is a mesophilic methanogen that was isolated from a swamp composed of drilling waste near Naples, Italy, shortly after the Archaea were recognized as a separate domain of life. Methanoplanus is the type genus in the family Methanoplanaceae, a taxon that felt into disuse since modern 16S rRNA gene sequences-based taxonomy was established. Methanoplanus is now placed within the Methanomicrobiaceae, a family that is so far poorly characterized at the genome level. The only other type strain of the genus with a sequenced genome, Methanoplanus petrolearius SEBR 4847(T), turned out to be misclassified and required reclassification to Methanolacinia. Both, Methanoplanus and Methanolacinia, needed taxonomic emendations due to a significant deviation of the G+C content of their genomes from previously published (pre-genome-sequence era) values. Until now genome sequences were published for only four of the 33 species with validly published names in the Methanomicrobiaceae. Here we describe the features of M. limicola, together with the improved-high-quality draft genome sequence and annotation of the type strain, M3(T). The 3,200,946 bp long chromosome (permanent draft sequence) with its 3,064 protein-coding and 65 RNA genes is a part of the G enomic E ncyclopedia of B acteria and Archaea project.
dc.language.isoenen
dc.titleGenome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia.en
dc.typeArticleen
dc.contributor.departmentLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.en
dc.identifier.journalStandards in genomic sciencesen
refterms.dateFOA2018-06-12T23:03:21Z
html.description.abstractMethanoplanus limicola Wildgruber et al. 1984 is a mesophilic methanogen that was isolated from a swamp composed of drilling waste near Naples, Italy, shortly after the Archaea were recognized as a separate domain of life. Methanoplanus is the type genus in the family Methanoplanaceae, a taxon that felt into disuse since modern 16S rRNA gene sequences-based taxonomy was established. Methanoplanus is now placed within the Methanomicrobiaceae, a family that is so far poorly characterized at the genome level. The only other type strain of the genus with a sequenced genome, Methanoplanus petrolearius SEBR 4847(T), turned out to be misclassified and required reclassification to Methanolacinia. Both, Methanoplanus and Methanolacinia, needed taxonomic emendations due to a significant deviation of the G+C content of their genomes from previously published (pre-genome-sequence era) values. Until now genome sequences were published for only four of the 33 species with validly published names in the Methanomicrobiaceae. Here we describe the features of M. limicola, together with the improved-high-quality draft genome sequence and annotation of the type strain, M3(T). The 3,200,946 bp long chromosome (permanent draft sequence) with its 3,064 protein-coding and 65 RNA genes is a part of the G enomic E ncyclopedia of B acteria and Archaea project.


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