Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)).
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Authors
Kappler, UlrikeDavenport, Karen
Beatson, Scott
Lapidus, Alla
Pan, Chongle
Han, Cliff
Montero-Calasanz, Maria Del Carmen
Land, Miriam
Hauser, Loren
Rohde, Manfred
Göker, Markus
Ivanova, Natalia
Woyke, Tanja
Klenk, Hans-Peter
Kyrpides, Nikos C
Issue Date
2016
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Show full item recordAbstract
Thioalkalimicrobium cyclicum Sorokin et al. 2002 is a member of the family Piscirickettsiaceae in the order Thiotrichales. The γ-proteobacterium belongs to the colourless sulfur-oxidizing bacteria isolated from saline soda lakes with stable alkaline pH, such as Lake Mono (California) and Soap Lake (Washington State). Strain ALM 1(T) is characterized by its adaptation to life in the oxic/anoxic interface towards the less saline aerobic waters (mixolimnion) of the stable stratified alkaline salt lakes. Strain ALM 1(T) is the first representative of the genus Thioalkalimicrobium whose genome sequence has been deciphered and the fourth genome sequence of a type strain of the Piscirickettsiaceae to be published. The 1,932,455 bp long chromosome with its 1,684 protein-coding and 50 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program (CSP) 2008.Citation
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). 2016, 11:38 Stand Genomic SciAffiliation
Helmholtzzentrum für Infektionsforschung, 38124 BraunschweigJournal
Standards in genomic sciencesPubMed ID
27274784Type
ArticleLanguage
enISSN
1944-3277ae974a485f413a2113503eed53cd6c53
10.1186/s40793-016-0162-x
Scopus Count
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