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    Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)).

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    Authors
    Kappler, Ulrike
    Davenport, Karen
    Beatson, Scott
    Lapidus, Alla
    Pan, Chongle
    Han, Cliff
    Montero-Calasanz, Maria Del Carmen
    Land, Miriam
    Hauser, Loren
    Rohde, Manfred
    Göker, Markus
    Ivanova, Natalia
    Woyke, Tanja
    Klenk, Hans-Peter
    Kyrpides, Nikos C
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    Issue Date
    2016
    
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    Abstract
    Thioalkalimicrobium cyclicum Sorokin et al. 2002 is a member of the family Piscirickettsiaceae in the order Thiotrichales. The γ-proteobacterium belongs to the colourless sulfur-oxidizing bacteria isolated from saline soda lakes with stable alkaline pH, such as Lake Mono (California) and Soap Lake (Washington State). Strain ALM 1(T) is characterized by its adaptation to life in the oxic/anoxic interface towards the less saline aerobic waters (mixolimnion) of the stable stratified alkaline salt lakes. Strain ALM 1(T) is the first representative of the genus Thioalkalimicrobium whose genome sequence has been deciphered and the fourth genome sequence of a type strain of the Piscirickettsiaceae to be published. The 1,932,455 bp long chromosome with its 1,684 protein-coding and 50 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program (CSP) 2008.
    Citation
    Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). 2016, 11:38 Stand Genomic Sci
    Affiliation
    Helmholtzzentrum für Infektionsforschung, 38124 Braunschweig
    Journal
    Standards in genomic sciences
    URI
    http://hdl.handle.net/10033/617651
    DOI
    10.1186/s40793-016-0162-x
    PubMed ID
    27274784
    Type
    Article
    Language
    en
    ISSN
    1944-3277
    ae974a485f413a2113503eed53cd6c53
    10.1186/s40793-016-0162-x
    Scopus Count
    Collections
    publications of the department Central Unit of Microscopy [ZEIM]

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